myRT

myRT report for GCA_904809735.1_25964_1_184

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Seq: CAJGEV010000001.1 Escherichia coli strain GU681 genome assembly, contig: ERS2428307SCcontig000001, whole genome shotgun sequence (759429 bp)
Overview 1 RT 1: 276700-282187 bp Neighborhood of RT #1 [276700, 282187] P Q RVT-Retrons DinI Feature: gene Location: 276700-278466 bp Feature: domain Description: P Location: 276727-278461 bp Feature: domain Description: P Location: 276727-278461 bp Feature: gene Location: 278466-279491 bp Feature: domain Description: Q Location: 278472-279486 bp Feature: domain Description: Q Location: 278472-279486 bp Feature: gene Location: 279533-281293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 279677-280301 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 279677-280301 bp Feature: gene Location: 281755-281988 bp Feature: domain Description: DinI Location: 281797-281983 bp Feature: domain Description: DinI Location: 281 797-281 983 bp Feature: gene Location: 281999-282187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, DinI (pfam06183)

Seq: CAJGEV010000008.1 Escherichia coli strain GU681 genome assembly, contig: ERS2428307SCcontig000008, whole genome shotgun sequence (275812 bp)
Overview 1 RT 1: 263587-269919 bp Neighborhood of RT #1 [263587, 269919] prfC PRK10597 RVT-Retrons TIR_2 CIF Feature: gene Location: 263587-265173 bp Feature: domain Description: prfC Location: 263605-265171 bp Feature: domain Description: prfC Location: 2 63605-2 65171 bp Feature: gene Location: 265393-265653 bp Feature: domain Description: PRK10597 Location: 265396-265636 bp Feature: domain Description: PRK10597 Location: 2 65396-2 65636 bp Feature: gene Location: 265987-267615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 266302-266893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 66302 -2 66893 bp Feature: domain Description: TIR_2 Location: 267220-267553 bp Feature: domain Description: TIR_2 Location: 2 672 2 0-2 67553 bp Feature: gene Location: 268822-269670 bp Feature: domain Description: CIF Location: 269134-269464 bp Feature: domain Description: CIF Location: 2 69134-2 69464 bp Feature: gene Location: 269734-269919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), CIF (pfam16374)