myRT

myRT report for GCA_904809775.1_24742_1_48

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Seq: CAJGEY010000006.1 Escherichia coli strain PLATE1_H10 genome assembly, contig: ERS1994997SCcontig000006, whole genome shotgun sequence (399795 bp)
Overview 1 RT 1: 99463-107092 bp Neighborhood of RT #1 [99463, 107556] HTH_33 DDE_3 RVT-AbiP2 Arm-DNA-bind_3 Feature: gene Location: 99463-99849 bp Feature: gene Location: 99925-100824 bp Ori: CAD5539748.1 Feature: domain Description: HTH_33 Location: 100087-100249 bp Feature: domain Description: HTH_33 Location: 1 00087-1 00249 bp Feature: domain Description: DDE_3 Location: 100291-100720 bp Feature: domain Description: DDE_3 Location: 1 00291 -1 00720 bp Feature: gene Location: 100926-102464 bp Ori: CAD5539768.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101355-101811 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 01 355-1 01 81 1 bp Feature: gene Location: 102687-106538 bp Feature: gene Location: 106807-107556 bp Ori: CAD5539809.1 Feature: domain Description: Arm-DNA-bind_3 Location: 106837-107092 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 06837-1 07092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, Arm-DNA-bind_3 (pfam13356)

Seq: CAJGEY010000002.1 Escherichia coli strain PLATE1_H10 genome assembly, contig: ERS1994997SCcontig000002, whole genome shotgun sequence (561441 bp)
Overview 1 RT 1: 555799-559693 bp Neighborhood of RT #1 [555799, 559693] RVT-GII GIIM PHA02517 Feature: gene Location: 555799-555981 bp Feature: gene Location: 556399-556740 bp Feature: gene Location: 557126-557836 bp Ori: CAD5510834.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 557138-557459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 557138-557459 bp Feature: domain Description: GIIM Note: maturase Location: 557537-557759 bp Feature: domain Description: GIIM Note: maturase Location: 557537-557759 bp Feature: gene Location: 558309-558653 bp Ori: CAD5510855.1 Feature: domain Description: PHA02517 Location: 558318-558651 bp Feature: domain Description: PHA02 517 Location: 558318-558651 bp Feature: gene Location: 558977-559693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)