myRT

myRT report for GCA_904809935.1_24742_1_299

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Seq: CAJGFO010000010.1 Escherichia coli strain PLATE1_G9 genome assembly, contig: ERS1994988SCcontig000010, whole genome shotgun sequence (185081 bp)
Overview 1 RT 1: 170211-175276 bp Neighborhood of RT #1 [170211, 175276] RVT-GII GIIM HNHc ArdA Feature: gene Location: 170211-170645 bp Feature: gene Location: 172041-172226 bp Feature: gene Location: 172186-173460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172189-172771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 721 89-1 72771 bp Feature: domain Description: GIIM Note: maturase Location: 172822-173056 bp Feature: domain Description: GIIM Note: maturase Location: 1 72822-1 73056 bp Feature: domain Description: HNHc Note: nucleases Location: 173266-173425 bp Feature: domain Description: HNHc Note: nucleases Location: 1 73266-1 73425 bp Feature: gene Location: 173717-174217 bp Feature: domain Description: ArdA Location: 173741-174206 bp Feature: domain Description: ArdA Location: 1 73741 -1 74206 bp Feature: gene Location: 174680-175276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), ArdA (pfam07275)

Seq: CAJGFO010000012.1 Escherichia coli strain PLATE1_G9 genome assembly, contig: ERS1994988SCcontig000012, whole genome shotgun sequence (162325 bp)
Overview 1 RT 1: 84343-89199 bp Neighborhood of RT #1 [84343, 89199] HTH_1 PBP2_CrgA_like_5 RVT-Retrons Feature: gene Location: 84343-85227 bp Feature: domain Description: HTH_1 Location: 84367-84541 bp Feature: domain Description: HTH_1 Location: 84367-84541 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 84622-85219 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 8462 2 -852 19 bp Feature: gene Location: 86413-86895 bp Feature: gene Location: 86890-87822 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86992-87583 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 86992 -87583 bp Feature: gene Location: 87809-88777 bp Feature: gene Location: 88978-89199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_CrgA_like_5 (cd08474), RVT-Retrons