myRT

myRT report for GCA_904809955.1_25964_1_207

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Seq: CAJGFQ010000015.1 Escherichia coli strain GU771 genome assembly, contig: ERS2428330SCcontig000015, whole genome shotgun sequence (122182 bp)
Overview 1 RT 1: 116110-121736 bp Neighborhood of RT #1 [116110, 121736] P Q RVT-Retrons Feature: gene Location: 116110-117876 bp Feature: domain Description: P Location: 116137-117871 bp Feature: domain Description: P Location: 1 1 61 37-1 1 7871 bp Feature: gene Location: 117876-118901 bp Feature: domain Description: Q Location: 117879-118893 bp Feature: domain Description: Q Location: 1 1 7879-1 1 8893 bp Feature: gene Location: 118937-119866 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 119036-119621 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 9036-1 1 9621 bp Feature: gene Location: 119868-120920 bp Feature: gene Location: 121401-121736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons

Seq: CAJGFQ010000032.1 Escherichia coli strain GU771 genome assembly, contig: ERS2428330SCcontig000032, whole genome shotgun sequence (9126 bp)
Overview 1 RT 1: 5614-8923 bp Neighborhood of RT #1 [5614, 8964] Tra5 T3SS_NleG RVT-GII GIIM Feature: gene Location: 5614-6513 bp Feature: domain Description: Tra5 Location: 5785-6406 bp Feature: domain Description: Tra5 Location: 5785-6406 bp Feature: gene Location: 7476-8096 bp Feature: domain Description: T3SS_NleG Location: 7794-8091 bp Feature: domain Description: T3SS_NleG Location: 7794-8091 bp Feature: gene Location: 8476-8964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8482-8620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8482 -862 0 bp Feature: domain Description: GIIM Note: maturase Location: 8704-8923 bp Feature: domain Description: GIIM Note: maturase Location: 8704-892 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), T3SS_NleG (pfam06416), RVT-GII, GIIM (pfam08388)