CRISPRone

CRISPRone report for SRR9686278

♦ Seq 1: NODE_7_length_173737_cov_7.235563

⇒Summary: seq-len = 173737 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120386-130493 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 120386-122047 bp Gene: unk Type: unknown Location: 122082-122243 bp Gene: unk Type: unknown Location: 122384-122560 bp Gene: pfam13280:WYL Type: other Location: 123326-124336 bp Gene: unk Type: unknown Location: 124375-125448 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 125550-130493 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_478029_cov_7.840293

⇒Summary: seq-len = 478029 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161705-165318 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 161705-162373 bp Gene: unk Type: unknown Location: 162376-163149 bp Gene: unk Type: unknown Location: 163157-164422 bp Gene: pfam13280:WYL Type: other Location: 164419-165318 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_442111_cov_7.198850

⇒Summary: seq-len = 442111 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 308715-323219 bp Zoom in on locus 1 x12 Gene: cls000004:cas6 Type: other Location: 308715-309446 bp Gene: unk Type: unknown Location: 309464-310090 bp Gene: unk Type: unknown Location: 310066-310845 bp Gene: cash17:cash17 Type: Type- Location: 310890-312317 bp Gene: unk Type: unknown Location: 312314-312793 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 312807-314216 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 314221-316023 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 316016-317155 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 317175-318014 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 318027-318437 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 318434-319384 bp Gene: cd09634:cas1 Type: universal Location: 319404-321674 bp Gene: cd09725:cas2 Type: universal Location: 321668-321958 bp CRISPR array Location: 322406-323219 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 322406-323219 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 322406-323219 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)