CRISPRone

CRISPRone report for SRR9686279

♦ Seq 1: NODE_1_length_625022_cov_8.490933

⇒Summary: seq-len = 625022 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 494530-504637 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 494530-499473 bp Gene: unk Type: unknown Location: 499575-500648 bp Gene: pfam13280:WYL Type: other Location: 500687-501697 bp Gene: unk Type: unknown Location: 502463-502639 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 502976-504637 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_24_length_70052_cov_8.626227

⇒Summary: seq-len = 70052 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31630-46070 bp Zoom in on locus 1 x12 CRISPR array Location: 31630-32442 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 31630-32442 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09634:cas1 Type: universal Location: 33174-35444 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35464-36414 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36411-36821 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36834-37673 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 37693-38832 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 38825-40627 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 40632-42041 bp Gene: unk Type: unknown Location: 42055-42534 bp Gene: cash17:cash17 Type: Type- Location: 42531-43958 bp Gene: unk Type: unknown Location: 44003-44782 bp Gene: unk Type: unknown Location: 44758-45384 bp Gene: cls000004:cas6 Type: other Location: 45402-46070 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31630-32442 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_428318_cov_9.276340

⇒Summary: seq-len = 428318 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111994-115607 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 111994-112662 bp Gene: unk Type: unknown Location: 112665-113438 bp Gene: unk Type: unknown Location: 113446-114711 bp Gene: pfam13280:WYL Type: other Location: 114708-115607 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)