CRISPRone

CRISPRone report for SRR9686283

♦ Seq 1: NODE_2_length_478028_cov_14.119197

⇒Summary: seq-len = 478028 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 312712-316325 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 312712-313611 bp Gene: unk Type: unknown Location: 313608-314873 bp Gene: unk Type: unknown Location: 314881-315654 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 315657-316325 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_4_length_354847_cov_13.122714

⇒Summary: seq-len = 354847 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31630-46070 bp Zoom in on locus 1 x12 CRISPR array Location: 31630-32442 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 31630-32442 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09634:cas1 Type: universal Location: 33174-35444 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35464-36414 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36411-36821 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36834-37673 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 37693-38832 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 38825-40627 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 40632-42041 bp Gene: unk Type: unknown Location: 42055-42534 bp Gene: cash17:cash17 Type: Type- Location: 42531-43958 bp Gene: unk Type: unknown Location: 44003-44782 bp Gene: unk Type: unknown Location: 44758-45384 bp Gene: cls000004:cas6 Type: other Location: 45402-46070 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31630-32442 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_8_length_173788_cov_13.191990

⇒Summary: seq-len = 173788 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43296-53403 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 43296-48239 bp Gene: unk Type: unknown Location: 48341-49414 bp Gene: pfam13280:WYL Type: other Location: 49453-50463 bp Gene: unk Type: unknown Location: 51229-51405 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 51742-53403 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)