CRISPRone

CRISPRone report for SRR9686286

♦ Seq 1: NODE_3_length_430791_cov_14.825255

⇒Summary: seq-len = 430791 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 384659-399163 bp Zoom in on locus 1 x12 Gene: cls000004:cas6 Type: other Location: 384659-385390 bp Gene: unk Type: unknown Location: 385408-386034 bp Gene: unk Type: unknown Location: 386010-386789 bp Gene: cash17:cash17 Type: Type- Location: 386834-388261 bp Gene: unk Type: unknown Location: 388258-388737 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 388751-390160 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 390165-391967 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 391960-393099 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 393119-393958 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 393971-394381 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 394378-395328 bp Gene: cd09634:cas1 Type: universal Location: 395348-397618 bp Gene: cd09725:cas2 Type: universal Location: 397612-397902 bp CRISPR array Location: 398350-399163 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 398350-399163 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 398350-399163 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_7_length_173421_cov_14.355122

⇒Summary: seq-len = 173421 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120386-130493 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 120386-122047 bp Gene: unk Type: unknown Location: 122082-122243 bp Gene: unk Type: unknown Location: 122384-122560 bp Gene: pfam13280:WYL Type: other Location: 123326-124336 bp Gene: unk Type: unknown Location: 124375-125448 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 125550-130493 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_477652_cov_15.521980

⇒Summary: seq-len = 477652 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161328-164941 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 161328-161996 bp Gene: unk Type: unknown Location: 161999-162772 bp Gene: unk Type: unknown Location: 162780-164045 bp Gene: pfam13280:WYL Type: other Location: 164042-164941 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)