CRISPRone

CRISPRone report for SRR9686296

♦ Seq 1: NODE_4_length_362832_cov_11.741830

⇒Summary: seq-len = 362832 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316700-331204 bp Zoom in on locus 1 x12 Gene: cls000004:cas6 Type: other Location: 316700-317431 bp Gene: unk Type: unknown Location: 317449-318075 bp Gene: unk Type: unknown Location: 318051-318830 bp Gene: cash17:cash17 Type: Type- Location: 318875-320302 bp Gene: unk Type: unknown Location: 320299-320778 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 320792-322201 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 322206-324008 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 324001-325140 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 325160-325999 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 326012-326422 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326419-327369 bp Gene: cd09634:cas1 Type: universal Location: 327389-329659 bp Gene: cd09725:cas2 Type: universal Location: 329653-329943 bp CRISPR array Location: 330391-331204 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 330391-331204 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 330391-331204 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_477652_cov_12.381648

⇒Summary: seq-len = 477652 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161328-164941 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 161328-161996 bp Gene: unk Type: unknown Location: 161999-162772 bp Gene: unk Type: unknown Location: 162780-164045 bp Gene: pfam13280:WYL Type: other Location: 164042-164941 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_8_length_173421_cov_11.706644

⇒Summary: seq-len = 173421 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120386-130493 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 120386-122047 bp Gene: unk Type: unknown Location: 122082-122243 bp Gene: unk Type: unknown Location: 122384-122560 bp Gene: pfam13280:WYL Type: other Location: 123326-124336 bp Gene: unk Type: unknown Location: 124375-125448 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 125550-130493 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)