CRISPRone

CRISPRone report for SRR9686297

♦ Seq 1: NODE_2_length_429873_cov_8.702218

⇒Summary: seq-len = 429873 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 312712-316325 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 312712-313611 bp Gene: unk Type: unknown Location: 313608-314873 bp Gene: unk Type: unknown Location: 314881-315654 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 315657-316325 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_10_length_147557_cov_8.270383

⇒Summary: seq-len = 147557 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120386-130493 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 120386-122047 bp Gene: unk Type: unknown Location: 122082-122243 bp Gene: unk Type: unknown Location: 122384-122560 bp Gene: pfam13280:WYL Type: other Location: 123326-124336 bp Gene: unk Type: unknown Location: 124375-125448 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 125550-130493 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_450156_cov_8.301986

⇒Summary: seq-len = 450156 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 118894-133334 bp Zoom in on locus 1 x12 CRISPR array Location: 118894-119706 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 118894-119706 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09725:cas2 Type: universal Location: 120154-120444 bp Gene: cd09634:cas1 Type: universal Location: 120438-122708 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 122728-123672 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 123675-124085 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 124098-124937 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 124957-126096 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 126089-127891 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 127896-129305 bp Gene: unk Type: unknown Location: 129319-129798 bp Gene: cash17:cash17 Type: Type- Location: 129795-131222 bp Gene: unk Type: unknown Location: 131267-132046 bp Gene: unk Type: unknown Location: 132022-132648 bp Gene: cls000004:cas6 Type: other Location: 132666-133334 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 118894-119706 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)