CRISPRone

CRISPRone report for SRR9686298

♦ Seq 1: NODE_4_length_354847_cov_12.860101

⇒Summary: seq-len = 354847 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 308715-323219 bp Zoom in on locus 1 x12 Gene: cls000004:cas6 Type: other Location: 308715-309446 bp Gene: unk Type: unknown Location: 309464-310090 bp Gene: unk Type: unknown Location: 310066-310845 bp Gene: cash17:cash17 Type: Type- Location: 310890-312317 bp Gene: unk Type: unknown Location: 312314-312793 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 312807-314216 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 314221-316023 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 316016-317155 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 317175-318014 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 318027-318437 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 318434-319384 bp Gene: cd09634:cas1 Type: universal Location: 319404-321674 bp Gene: cd09725:cas2 Type: universal Location: 321668-321958 bp CRISPR array Location: 322406-323219 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 322406-323219 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 322406-323219 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_6_length_173421_cov_12.861616

⇒Summary: seq-len = 173421 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42929-53036 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 42929-47872 bp Gene: unk Type: unknown Location: 47974-49047 bp Gene: pfam13280:WYL Type: other Location: 49086-50096 bp Gene: unk Type: unknown Location: 50862-51038 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 51375-53036 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_477652_cov_13.391535

⇒Summary: seq-len = 477652 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161328-164941 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 161328-161996 bp Gene: unk Type: unknown Location: 161999-162772 bp Gene: unk Type: unknown Location: 162780-164045 bp Gene: pfam13280:WYL Type: other Location: 164042-164941 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)