CRISPRone

CRISPRone report for SRR9686302

♦ Seq 1: NODE_7_length_173421_cov_19.852387

⇒Summary: seq-len = 173421 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120386-130493 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 120386-122047 bp Gene: unk Type: unknown Location: 122082-122243 bp Gene: unk Type: unknown Location: 122384-122560 bp Gene: pfam13280:WYL Type: other Location: 123326-124336 bp Gene: unk Type: unknown Location: 124375-125448 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 125550-130493 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_426989_cov_21.565127

⇒Summary: seq-len = 426989 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110665-114278 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 110665-111333 bp Gene: unk Type: unknown Location: 111336-112109 bp Gene: unk Type: unknown Location: 112117-113382 bp Gene: pfam13280:WYL Type: other Location: 113379-114278 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_3_length_381700_cov_20.189247

⇒Summary: seq-len = 381700 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 335568-350072 bp Zoom in on locus 1 x12 Gene: cls000004:cas6 Type: other Location: 335568-336299 bp Gene: unk Type: unknown Location: 336317-336943 bp Gene: unk Type: unknown Location: 336919-337698 bp Gene: cash17:cash17 Type: Type- Location: 337743-339170 bp Gene: unk Type: unknown Location: 339167-339646 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 339660-341069 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 341074-342876 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 342869-344008 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 344028-344867 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 344880-345290 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 345287-346237 bp Gene: cd09634:cas1 Type: universal Location: 346257-348527 bp Gene: cd09725:cas2 Type: universal Location: 348521-348811 bp CRISPR array Location: 349259-350072 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 349259-350072 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 349259-350072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)