CRISPRone

CRISPRone report for SRR9686305

♦ Seq 1: NODE_3_length_477652_cov_16.094682

⇒Summary: seq-len = 477652 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 312712-316325 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 312712-313611 bp Gene: unk Type: unknown Location: 313608-314873 bp Gene: unk Type: unknown Location: 314881-315654 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 315657-316325 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_7_length_173421_cov_14.980140

⇒Summary: seq-len = 173421 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42929-53036 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 42929-47872 bp Gene: unk Type: unknown Location: 47974-49047 bp Gene: pfam13280:WYL Type: other Location: 49086-50096 bp Gene: unk Type: unknown Location: 50862-51038 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 51375-53036 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_542400_cov_15.474088

⇒Summary: seq-len = 542400 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 496268-510772 bp Zoom in on locus 1 x12 Gene: cls000004:cas6 Type: other Location: 496268-496999 bp Gene: unk Type: unknown Location: 497017-497643 bp Gene: unk Type: unknown Location: 497619-498398 bp Gene: cash17:cash17 Type: Type- Location: 498443-499870 bp Gene: unk Type: unknown Location: 499867-500346 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 500360-501769 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 501774-503576 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 503569-504708 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 504728-505567 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 505580-505990 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 505987-506937 bp Gene: cd09634:cas1 Type: universal Location: 506957-509227 bp Gene: cd09725:cas2 Type: universal Location: 509221-509511 bp CRISPR array Location: 509959-510772 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 509959-510772 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 509959-510772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)