CRISPRone

CRISPRone report for SRR9713224

♦ Seq 1: NODE_37_length_32189_cov_34.476629

⇒Summary: seq-len = 32189 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18-547 bp Zoom in on locus 1 x8 CRISPR array Location: 18-547 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 18-547 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 18-547 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_24_length_81274_cov_30.422167

⇒Summary: seq-len = 81274 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66834-81255 bp Zoom in on locus 1 x11 Gene: cls000004:cas6 Type: other Location: 66834-67565 bp Gene: unk Type: unknown Location: 67583-68209 bp Gene: unk Type: unknown Location: 68185-68964 bp Gene: cash17:cash17 Type: Type- Location: 69009-70436 bp Gene: unk Type: unknown Location: 70433-70912 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 70926-72335 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 72340-74142 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 74135-75274 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 75294-76133 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 76146-76556 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 76553-77503 bp Gene: cd09634:cas1 Type: universal Location: 77523-79793 bp Gene: cd09725:cas2 Type: universal Location: 79787-80077 bp CRISPR array Location: 80525-81255 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 80525-81255 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 80525-81255 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_798_length_374_cov_1.122257

⇒Summary: seq-len = 374 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-373 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 2-373 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_1_length_444843_cov_36.688892

⇒Summary: seq-len = 444843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 342108-345721 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 342108-343007 bp Gene: unk Type: unknown Location: 343004-344269 bp Gene: unk Type: unknown Location: 344277-345050 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 345053-345721 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)