CRISPRone

CRISPRone report for SRR9713226

♦ Seq 1: NODE_19_length_97022_cov_13.900688

⇒Summary: seq-len = 97022 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31644-46631 bp Zoom in on locus 1 x20 CRISPR array Location: 31644-33003 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 31644-33003 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09725:cas2 Type: universal Location: 33451-33741 bp Gene: cd09634:cas1 Type: universal Location: 33735-36005 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36025-36975 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36972-37382 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 37395-38234 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 38254-39393 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 39386-41188 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 41193-42602 bp Gene: unk Type: unknown Location: 42616-43095 bp Gene: cash17:cash17 Type: Type- Location: 43092-44519 bp Gene: unk Type: unknown Location: 44564-45343 bp Gene: unk Type: unknown Location: 45319-45945 bp Gene: cls000004:cas6 Type: other Location: 45963-46631 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31644-33003 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_444843_cov_15.963511

⇒Summary: seq-len = 444843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 342108-345721 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 342108-343007 bp Gene: unk Type: unknown Location: 343004-344269 bp Gene: unk Type: unknown Location: 344277-345050 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 345053-345721 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)