CRISPRone

CRISPRone report for SRR9713230

♦ Seq 1: NODE_2_length_444843_cov_17.639264

⇒Summary: seq-len = 444843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 342108-345721 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 342108-343007 bp Gene: unk Type: unknown Location: 343004-344269 bp Gene: unk Type: unknown Location: 344277-345050 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 345053-345721 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_15_length_113011_cov_15.111725

⇒Summary: seq-len = 113011 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66454-81369 bp Zoom in on locus 1 x18 Gene: cls000004:cas6 Type: other Location: 66454-67185 bp Gene: unk Type: unknown Location: 67203-67829 bp Gene: unk Type: unknown Location: 67805-68584 bp Gene: cash17:cash17 Type: Type- Location: 68629-70056 bp Gene: unk Type: unknown Location: 70053-70532 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 70546-71955 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 71960-73762 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 73755-74894 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 74914-75753 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 75766-76176 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 76173-77123 bp Gene: cd09634:cas1 Type: universal Location: 77143-79413 bp Gene: cd09725:cas2 Type: universal Location: 79407-79697 bp CRISPR array Location: 80145-81369 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 80145-81369 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 80145-81369 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)