CRISPRone

CRISPRone report for SRR9713233

♦ Seq 1: NODE_33_length_48401_cov_8.020891

⇒Summary: seq-len = 48401 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36360-39973 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 36360-37259 bp Gene: unk Type: unknown Location: 37256-38521 bp Gene: unk Type: unknown Location: 38529-39302 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 39305-39973 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_18_length_109221_cov_7.217046

⇒Summary: seq-len = 109221 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62944-77590 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 62944-63675 bp Gene: unk Type: unknown Location: 63693-64319 bp Gene: unk Type: unknown Location: 64295-65074 bp Gene: cash17:cash17 Type: Type- Location: 65119-66546 bp Gene: unk Type: unknown Location: 66543-67022 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 67036-68445 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 68450-70252 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 70245-71384 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 71404-72243 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 72256-72666 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 72663-73613 bp Gene: cd09634:cas1 Type: universal Location: 73633-75903 bp Gene: cd09725:cas2 Type: universal Location: 75897-76187 bp CRISPR array Location: 76635-77590 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 76635-77590 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 76635-77590 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)