CRISPRone

CRISPRone report for SRR9713235

♦ Seq 1: NODE_25_length_65312_cov_8.283724

⇒Summary: seq-len = 65312 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51662-64621 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 51662-52393 bp Gene: unk Type: unknown Location: 52411-53037 bp Gene: unk Type: unknown Location: 53013-53792 bp Gene: cash17:cash17 Type: Type- Location: 53837-55264 bp Gene: unk Type: unknown Location: 55261-55740 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 55754-57163 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 57168-58970 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 58963-60102 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 60122-60961 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 60974-61384 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 61381-62331 bp Gene: cd09634:cas1 Type: universal Location: 62351-64621 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_484499_cov_9.273511

⇒Summary: seq-len = 484499 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 126525-130138 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 126525-127193 bp Gene: unk Type: unknown Location: 127196-127969 bp Gene: unk Type: unknown Location: 127977-129242 bp Gene: pfam13280:WYL Type: other Location: 129239-130138 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_41_length_32641_cov_8.323329

⇒Summary: seq-len = 32641 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31638-32592 bp Zoom in on locus 1 x14 CRISPR array Location: 31638-32592 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31638-32592 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31638-32592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)