CRISPRone

CRISPRone report for SRR9713237

♦ Seq 1: NODE_22_length_70162_cov_10.104697

⇒Summary: seq-len = 70162 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23885-38531 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 23885-24616 bp Gene: unk Type: unknown Location: 24634-25260 bp Gene: unk Type: unknown Location: 25236-26015 bp Gene: cash17:cash17 Type: Type- Location: 26060-27487 bp Gene: unk Type: unknown Location: 27484-27963 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 27977-29386 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 29391-31193 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 31186-32325 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 32345-33184 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 33197-33607 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 33604-34554 bp Gene: cd09634:cas1 Type: universal Location: 34574-36844 bp Gene: cd09725:cas2 Type: universal Location: 36838-37128 bp CRISPR array Location: 37576-38531 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 37576-38531 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37576-38531 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_4_length_389142_cov_12.153737

⇒Summary: seq-len = 389142 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8532-12145 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 8532-9200 bp Gene: unk Type: unknown Location: 9203-9976 bp Gene: unk Type: unknown Location: 9984-11249 bp Gene: pfam13280:WYL Type: other Location: 11246-12145 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)