CRISPRone

CRISPRone report for SRR9713238

♦ Seq 1: NODE_1_length_435304_cov_6.704316

⇒Summary: seq-len = 435304 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 307844-311457 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 307844-308743 bp Gene: unk Type: unknown Location: 308740-310005 bp Gene: unk Type: unknown Location: 310013-310786 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 310789-311457 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_45_length_36745_cov_6.176043

⇒Summary: seq-len = 36745 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6732-21378 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 6732-7463 bp Gene: unk Type: unknown Location: 7481-8107 bp Gene: unk Type: unknown Location: 8083-8862 bp Gene: cash17:cash17 Type: Type- Location: 8907-10334 bp Gene: unk Type: unknown Location: 10331-10810 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 10824-12233 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 12238-14040 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 14033-15172 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 15192-16031 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 16044-16454 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 16451-17401 bp Gene: cd09634:cas1 Type: universal Location: 17421-19691 bp CRISPR array Location: 20423-21378 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 20423-21378 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20423-21378 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)