CRISPRone

CRISPRone report for SRR9713239

♦ Seq 1: NODE_18_length_90816_cov_6.597008

⇒Summary: seq-len = 90816 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 30562-45144 bp Zoom in on locus 1 x14 CRISPR array Location: 30562-31516 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 30562-31516 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 32248-34518 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 34538-35488 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 35485-35895 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35908-36747 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 36767-37906 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 37899-39701 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 39706-41115 bp Gene: unk Type: unknown Location: 41129-41608 bp Gene: cash17:cash17 Type: Type- Location: 41605-43032 bp Gene: unk Type: unknown Location: 43077-43856 bp Gene: unk Type: unknown Location: 43832-44458 bp Gene: cls000004:cas6 Type: other Location: 44476-45144 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 30562-31516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_9_length_140678_cov_7.198147

⇒Summary: seq-len = 140678 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 105925-109538 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 105925-106824 bp Gene: unk Type: unknown Location: 106821-108086 bp Gene: unk Type: unknown Location: 108094-108867 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 108870-109538 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)