CRISPRone

CRISPRone report for SRR9713254

♦ Seq 1: NODE_53_length_31881_cov_16.696632

⇒Summary: seq-len = 31881 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-245 bp Zoom in on locus 1 x4 CRISPR array Location: 0-245 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 0-245 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_13_length_109159_cov_17.247076

⇒Summary: seq-len = 109159 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94707-109141 bp Zoom in on locus 1 x11 Gene: cls000004:cas6 Type: other Location: 94707-95438 bp Gene: unk Type: unknown Location: 95456-96082 bp Gene: unk Type: unknown Location: 96058-96837 bp Gene: cash17:cash17 Type: Type- Location: 96882-98309 bp Gene: unk Type: unknown Location: 98306-98785 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 98799-100208 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 100213-102015 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 102008-103147 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 103167-104006 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 104019-104429 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 104426-105376 bp Gene: cd09634:cas1 Type: universal Location: 105396-107666 bp Gene: cd09725:cas2 Type: universal Location: 107660-107950 bp CRISPR array Location: 108398-109141 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 108398-109141 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 108398-109141 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_8_length_157554_cov_18.611502

⇒Summary: seq-len = 157554 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10078-13691 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10078-10977 bp Gene: unk Type: unknown Location: 10974-12239 bp Gene: unk Type: unknown Location: 12247-13020 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13023-13691 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)