CRISPRone

CRISPRone report for SRR9713259

♦ Seq 1: NODE_10_length_154427_cov_23.392299

⇒Summary: seq-len = 154427 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10078-13691 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10078-10977 bp Gene: unk Type: unknown Location: 10974-12239 bp Gene: unk Type: unknown Location: 12247-13020 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13023-13691 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_331405_cov_20.808411

⇒Summary: seq-len = 331405 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316953-331387 bp Zoom in on locus 1 x11 Gene: cls000004:cas6 Type: other Location: 316953-317684 bp Gene: unk Type: unknown Location: 317702-318328 bp Gene: unk Type: unknown Location: 318304-319083 bp Gene: cash17:cash17 Type: Type- Location: 319128-320555 bp Gene: unk Type: unknown Location: 320552-321031 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 321045-322454 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 322459-324261 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 324254-325393 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 325413-326252 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 326265-326675 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326672-327622 bp Gene: cd09634:cas1 Type: universal Location: 327642-329912 bp Gene: cd09725:cas2 Type: universal Location: 329906-330196 bp CRISPR array Location: 330644-331387 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 330644-331387 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 330644-331387 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_51_length_31884_cov_20.958811

⇒Summary: seq-len = 31884 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-248 bp Zoom in on locus 1 x4 CRISPR array Location: 1-248 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-248 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-248 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)