CRISPRone

CRISPRone report for SRR9713262

♦ Seq 1: NODE_344_length_4734_cov_4.053858

⇒Summary: seq-len = 4734 bp; # of CRISPR array = 0; # of cas gene = 4  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-4732 bp Zoom in on locus 1 Gene: cd09726:csm3gr7 Type: Subtype-III-D Location: 2-493 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 513-1652 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 1645-3447 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 3452-4732 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_116_length_10914_cov_4.199282

⇒Summary: seq-len = 10914 bp; # of CRISPR array = 1; # of cas gene = 4  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5220-10913 bp Zoom in on locus 1 x14 CRISPR array Location: 5220-6174 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 5220-6174 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 6906-9176 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 9196-10146 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 10143-10553 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 10566-10913 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5220-6174 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)