CRISPRone

CRISPRone report for SRR9713263

♦ Seq 1: NODE_11_length_162272_cov_9.445619

⇒Summary: seq-len = 162272 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 127076-130689 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 127076-127975 bp Gene: unk Type: unknown Location: 127972-129237 bp Gene: unk Type: unknown Location: 129245-130018 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 130021-130689 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_362935_cov_8.806302

⇒Summary: seq-len = 362935 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316658-331304 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 316658-317389 bp Gene: unk Type: unknown Location: 317407-318033 bp Gene: unk Type: unknown Location: 318009-318788 bp Gene: cash17:cash17 Type: Type- Location: 318833-320260 bp Gene: unk Type: unknown Location: 320257-320736 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 320750-322159 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 322164-323966 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 323959-325098 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 325118-325957 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 325970-326380 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326377-327327 bp Gene: cd09634:cas1 Type: universal Location: 327347-329617 bp Gene: cd09725:cas2 Type: universal Location: 329611-329901 bp CRISPR array Location: 330349-331304 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 330349-331304 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 330349-331304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)