CRISPRone

CRISPRone report for SRR9713265

♦ Seq 1: NODE_14_length_167595_cov_9.580476

⇒Summary: seq-len = 167595 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 159363-167207 bp Zoom in on locus 1 x15 Gene: cd09643:cas9 Type: Subtype-II-C Location: 159363-163673 bp Gene: unk Type: unknown Location: 163689-164213 bp Gene: unk Type: unknown Location: 164280-164588 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 164708-165640 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 165644-165976 bp CRISPR array Location: 166085-167207 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 166085-167207 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 166085-167207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_30_length_51245_cov_6.064075

⇒Summary: seq-len = 51245 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19601-21984 bp Zoom in on locus 1 x10 CRISPR array Location: 19601-20210 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 19601-20210 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09725:cas2 Type: universal Location: 20423-20686 bp Gene: cd09722:cas1 Type: universal Location: 20689-20928 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 20921-21301 bp Gene: cd09652:cas6 Type: other Location: 21313-21984 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 19601-20210 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_5_length_199609_cov_6.019829

⇒Summary: seq-len = 199609 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 69834-79963 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 69834-75974 bp Gene: pfam13280:WYL Type: other Location: 76013-77023 bp Gene: unk Type: unknown Location: 77789-77965 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 78302-79963 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_9_length_182984_cov_6.506426

⇒Summary: seq-len = 182984 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 89839-93449 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 89839-90738 bp Gene: unk Type: unknown Location: 90735-92000 bp Gene: unk Type: unknown Location: 92008-92778 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 92781-93449 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)