CRISPRone

CRISPRone report for SRR9713276

♦ Seq 1: NODE_131_length_8829_cov_5.648735

⇒Summary: seq-len = 8829 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7840-8794 bp Zoom in on locus 1 x14 CRISPR array Location: 7840-8794 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 7840-8794 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 7840-8794 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_135_length_8293_cov_6.006919

⇒Summary: seq-len = 8293 bp; # of CRISPR array = 0; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149-7602 bp Zoom in on locus 1 Gene: pfam12469:cas10 Type: Subtype-III-B Location: 149-1951 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1944-3083 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3103-3942 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3955-4365 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4368-5312 bp Gene: cd09634:cas1 Type: universal Location: 5332-7602 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_75_length_23578_cov_5.978617

⇒Summary: seq-len = 23578 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18208-23577 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 18208-18939 bp Gene: unk Type: unknown Location: 18957-19583 bp Gene: unk Type: unknown Location: 19559-20338 bp Gene: cash17:cash17 Type: Type- Location: 20383-21810 bp Gene: unk Type: unknown Location: 21807-22286 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 22300-23577 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_4_length_92912_cov_6.484562

⇒Summary: seq-len = 92912 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71563-75176 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 71563-72462 bp Gene: unk Type: unknown Location: 72459-73724 bp Gene: unk Type: unknown Location: 73732-74505 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 74508-75176 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)