CRISPRone

CRISPRone report for SRR9713277

♦ Seq 1: NODE_17_length_104854_cov_54.518469

⇒Summary: seq-len = 104854 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 67884-71497 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 67884-68552 bp Gene: unk Type: unknown Location: 68555-69328 bp Gene: unk Type: unknown Location: 69336-70601 bp Gene: pfam13280:WYL Type: other Location: 70598-71497 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_21_length_75555_cov_32.718079

⇒Summary: seq-len = 75555 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22752-37334 bp Zoom in on locus 1 x14 CRISPR array Location: 22752-23706 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 22752-23706 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09725:cas2 Type: universal Location: 24154-24444 bp Gene: cd09634:cas1 Type: universal Location: 24438-26708 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 26728-27678 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 27675-28085 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 28098-28937 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 28957-30096 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 30089-31891 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 31896-33305 bp Gene: unk Type: unknown Location: 33319-33798 bp Gene: cash17:cash17 Type: Type- Location: 33795-35222 bp Gene: unk Type: unknown Location: 35267-36046 bp Gene: unk Type: unknown Location: 36022-36648 bp Gene: cls000004:cas6 Type: other Location: 36666-37334 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22752-23706 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)