CRISPRone

CRISPRone report for SRR9713278

♦ Seq 1: NODE_165_length_8844_cov_3.765275

⇒Summary: seq-len = 8844 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-8644 bp Zoom in on locus 1 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 2-1186 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 1191-2993 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 2986-4125 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4145-4984 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 4997-5407 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 5410-6354 bp Gene: cd09634:cas1 Type: universal Location: 6374-8644 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_365_length_4493_cov_4.366832

⇒Summary: seq-len = 4493 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3517-4471 bp Zoom in on locus 1 x14 CRISPR array Location: 3517-4471 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 3517-4471 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3517-4471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_80_length_13678_cov_4.574983

⇒Summary: seq-len = 13678 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132-3745 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 132-800 bp Gene: unk Type: unknown Location: 803-1576 bp Gene: unk Type: unknown Location: 1584-2849 bp Gene: pfam13280:WYL Type: other Location: 2846-3745 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)