CRISPRone

CRISPRone report for SRR9713279

♦ Seq 1: NODE_2_length_431135_cov_10.600350

⇒Summary: seq-len = 431135 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 73161-76774 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 73161-73829 bp Gene: unk Type: unknown Location: 73832-74605 bp Gene: unk Type: unknown Location: 74613-75878 bp Gene: pfam13280:WYL Type: other Location: 75875-76774 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_3_length_413551_cov_9.305568

⇒Summary: seq-len = 413551 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 367274-381920 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 367274-368005 bp Gene: unk Type: unknown Location: 368023-368649 bp Gene: unk Type: unknown Location: 368625-369404 bp Gene: cash17:cash17 Type: Type- Location: 369449-370876 bp Gene: unk Type: unknown Location: 370873-371352 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 371366-372775 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 372780-374582 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 374575-375714 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 375734-376573 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 376586-376996 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 376993-377943 bp Gene: cd09634:cas1 Type: universal Location: 377963-380233 bp Gene: cd09725:cas2 Type: universal Location: 380227-380517 bp CRISPR array Location: 380965-381920 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 380965-381920 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 380965-381920 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)