CRISPRone

CRISPRone report for SRR9713280

♦ Seq 1: NODE_3_length_362937_cov_9.191850

⇒Summary: seq-len = 362937 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316660-331306 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 316660-317391 bp Gene: unk Type: unknown Location: 317409-318035 bp Gene: unk Type: unknown Location: 318011-318790 bp Gene: cash17:cash17 Type: Type- Location: 318835-320262 bp Gene: unk Type: unknown Location: 320259-320738 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 320752-322161 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 322166-323968 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 323961-325100 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 325120-325959 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 325972-326382 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326379-327329 bp Gene: cd09634:cas1 Type: universal Location: 327349-329619 bp Gene: cd09725:cas2 Type: universal Location: 329613-329903 bp CRISPR array Location: 330351-331306 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 330351-331306 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 330351-331306 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_524109_cov_10.004952

⇒Summary: seq-len = 524109 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 143864-147477 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 143864-144532 bp Gene: unk Type: unknown Location: 144535-145308 bp Gene: unk Type: unknown Location: 145316-146581 bp Gene: pfam13280:WYL Type: other Location: 146578-147477 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)