CRISPRone

CRISPRone report for SRR9713293

♦ Seq 1: NODE_19_length_107213_cov_10.722289

⇒Summary: seq-len = 107213 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 60656-75571 bp Zoom in on locus 1 x18 Gene: cls000004:cas6 Type: other Location: 60656-61387 bp Gene: unk Type: unknown Location: 61405-62031 bp Gene: unk Type: unknown Location: 62007-62786 bp Gene: cash17:cash17 Type: Type- Location: 62831-64258 bp Gene: unk Type: unknown Location: 64255-64734 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 64748-66157 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 66162-67964 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 67957-69096 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 69116-69955 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 69968-70378 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 70375-71325 bp Gene: cd09634:cas1 Type: universal Location: 71345-73615 bp Gene: cd09725:cas2 Type: universal Location: 73609-73899 bp CRISPR array Location: 74347-75571 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 74347-75571 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 74347-75571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_406135_cov_12.856972

⇒Summary: seq-len = 406135 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 303400-307013 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 303400-304299 bp Gene: unk Type: unknown Location: 304296-305561 bp Gene: unk Type: unknown Location: 305569-306342 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 306345-307013 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)