CRISPRone

CRISPRone report for SRR9713299

♦ Seq 1: NODE_12_length_143413_cov_9.239254

⇒Summary: seq-len = 143413 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 89835-93445 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 89835-90734 bp Gene: unk Type: unknown Location: 90731-91996 bp Gene: unk Type: unknown Location: 92004-92774 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 92777-93445 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_24_length_79363_cov_8.048154

⇒Summary: seq-len = 79363 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 69834-79360 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 69834-75974 bp Gene: pfam13280:WYL Type: other Location: 76013-77023 bp Gene: unk Type: unknown Location: 77789-77965 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 78302-79360 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_9_length_167749_cov_12.097398

⇒Summary: seq-len = 167749 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 159363-167361 bp Zoom in on locus 1 x17 Gene: cd09643:cas9 Type: Subtype-II-C Location: 159363-163673 bp Gene: unk Type: unknown Location: 163689-164213 bp Gene: unk Type: unknown Location: 164280-164588 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 164708-165640 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 165644-165976 bp CRISPR array Location: 166085-167361 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 166085-167361 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 166085-167361 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_2_length_383366_cov_8.380467

⇒Summary: seq-len = 383366 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272758-275141 bp Zoom in on locus 1 x10 CRISPR array Location: 272758-273367 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 272758-273367 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09725:cas2 Type: universal Location: 273580-273843 bp Gene: cd09722:cas1 Type: universal Location: 273846-274085 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 274078-274458 bp Gene: cd09652:cas6 Type: other Location: 274470-275141 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 272758-273367 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)