CRISPRone

CRISPRone report for SRR9713307

♦ Seq 1: NODE_19_length_85155_cov_20.803079

⇒Summary: seq-len = 85155 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25250-39832 bp Zoom in on locus 1 x14 CRISPR array Location: 25250-26204 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 25250-26204 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 26936-29206 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 29226-30176 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 30173-30583 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 30596-31435 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 31455-32594 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 32587-34389 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 34394-35803 bp Gene: unk Type: unknown Location: 35817-36296 bp Gene: cash17:cash17 Type: Type- Location: 36293-37720 bp Gene: unk Type: unknown Location: 37765-38544 bp Gene: unk Type: unknown Location: 38520-39146 bp Gene: cls000004:cas6 Type: other Location: 39164-39832 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25250-26204 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_231971_cov_31.591960

⇒Summary: seq-len = 231971 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83931-87544 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 83931-84830 bp Gene: unk Type: unknown Location: 84827-86092 bp Gene: unk Type: unknown Location: 86100-86873 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 86876-87544 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)