CRISPRone

CRISPRone report for SRR9713308

♦ Seq 1: NODE_46_length_37301_cov_32.852226

⇒Summary: seq-len = 37301 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 458-13354 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 458-2728 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2748-3698 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3695-4105 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4118-4957 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 4977-6116 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6109-7911 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 7916-9325 bp Gene: unk Type: unknown Location: 9339-9818 bp Gene: cash17:cash17 Type: Type- Location: 9815-11242 bp Gene: unk Type: unknown Location: 11287-12066 bp Gene: unk Type: unknown Location: 12042-12668 bp Gene: cls000004:cas6 Type: other Location: 12686-13354 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_10_length_165158_cov_52.948051

⇒Summary: seq-len = 165158 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83970-87583 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 83970-84869 bp Gene: unk Type: unknown Location: 84866-86131 bp Gene: unk Type: unknown Location: 86139-86912 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 86915-87583 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_50_length_32865_cov_36.162938

⇒Summary: seq-len = 32865 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)