CRISPRone

CRISPRone report for SRR9713310

♦ Seq 1: NODE_6_length_160798_cov_28.483573

⇒Summary: seq-len = 160798 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 84285-87898 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 84285-85184 bp Gene: unk Type: unknown Location: 85181-86446 bp Gene: unk Type: unknown Location: 86454-87227 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 87230-87898 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_47_length_32622_cov_19.553474

⇒Summary: seq-len = 32622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32587 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_104_length_8543_cov_8.631833

⇒Summary: seq-len = 8543 bp; # of CRISPR array = 0; # of cas gene = 8  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27-8541 bp Zoom in on locus 1 Gene: cd09725:cas2 Type: universal Location: 27-317 bp Gene: pfam01867:cas1 Type: universal Location: 463-2580 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2600-3544 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3547-3957 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3970-4809 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 4829-5968 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 5961-7763 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 7768-8541 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)