CRISPRone

CRISPRone report for SRR9713311

♦ Seq 1: NODE_22_length_86942_cov_24.059468

⇒Summary: seq-len = 86942 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 47065-61711 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 47065-47796 bp Gene: unk Type: unknown Location: 47814-48440 bp Gene: unk Type: unknown Location: 48416-49195 bp Gene: cash17:cash17 Type: Type- Location: 49240-50667 bp Gene: unk Type: unknown Location: 50664-51143 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 51157-52566 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 52571-54373 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 54366-55505 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 55525-56364 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 56377-56787 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 56784-57734 bp Gene: cd09634:cas1 Type: universal Location: 57754-60024 bp Gene: cd09725:cas2 Type: universal Location: 60018-60308 bp CRISPR array Location: 60756-61711 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 60756-61711 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 60756-61711 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_4_length_191153_cov_36.504390

⇒Summary: seq-len = 191153 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 84121-87734 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 84121-85020 bp Gene: unk Type: unknown Location: 85017-86282 bp Gene: unk Type: unknown Location: 86290-87063 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 87066-87734 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)