CRISPRone

CRISPRone report for SRR9713313

♦ Seq 1: NODE_62_length_23394_cov_24.899867

⇒Summary: seq-len = 23394 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22375-23329 bp Zoom in on locus 1 x14 CRISPR array Location: 22375-23329 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 22375-23329 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 22375-23329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_81_length_9019_cov_9.643351

⇒Summary: seq-len = 9019 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 674-9016 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 674-2944 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2964-3908 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3911-4321 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4334-5173 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5193-6332 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6325-8127 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8132-9016 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_4_length_192125_cov_31.782949

⇒Summary: seq-len = 192125 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 44085-47698 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 44085-44984 bp Gene: unk Type: unknown Location: 44981-46246 bp Gene: unk Type: unknown Location: 46254-47027 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 47030-47698 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)