CRISPRone

CRISPRone report for SRR9713316

♦ Seq 1: NODE_67_length_23385_cov_24.958380

⇒Summary: seq-len = 23385 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22392-23346 bp Zoom in on locus 1 x14 CRISPR array Location: 22392-23346 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 22392-23346 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 22392-23346 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_9_length_134279_cov_33.915060

⇒Summary: seq-len = 134279 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 80747-84360 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 80747-81415 bp Gene: unk Type: unknown Location: 81418-82191 bp Gene: unk Type: unknown Location: 82199-83464 bp Gene: pfam13280:WYL Type: other Location: 83461-84360 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_87_length_9512_cov_9.450248

⇒Summary: seq-len = 9512 bp; # of CRISPR array = 0; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 605-9472 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 605-2875 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2895-3839 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3842-4252 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4265-5104 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5124-6263 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6256-8058 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8063-9472 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)