CRISPRone

CRISPRone report for SRR9713318

♦ Seq 1: NODE_15_length_112813_cov_8.764043

⇒Summary: seq-len = 112813 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 99123-102736 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 99123-99791 bp Gene: unk Type: unknown Location: 99794-100567 bp Gene: unk Type: unknown Location: 100575-101840 bp Gene: pfam13280:WYL Type: other Location: 101837-102736 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_19_length_107262_cov_7.671281

⇒Summary: seq-len = 107262 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 60569-75620 bp Zoom in on locus 1 x20 Gene: cls000004:cas6 Type: other Location: 60569-61300 bp Gene: unk Type: unknown Location: 61318-61944 bp Gene: unk Type: unknown Location: 61920-62699 bp Gene: cash17:cash17 Type: Type- Location: 62744-64171 bp Gene: unk Type: unknown Location: 64168-64647 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 64661-66070 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 66075-67877 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 67870-69009 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 69029-69868 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 69881-70291 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 70288-71238 bp Gene: cd09634:cas1 Type: universal Location: 71258-73528 bp Gene: cd09725:cas2 Type: universal Location: 73522-73812 bp CRISPR array Location: 74260-75620 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 74260-75620 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 74260-75620 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)