CRISPRone

CRISPRone report for SRR9713320

♦ Seq 1: NODE_35_length_32189_cov_53.014097

⇒Summary: seq-len = 32189 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18-547 bp Zoom in on locus 1 x8 CRISPR array Location: 18-547 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 18-547 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 18-547 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_444843_cov_53.423381

⇒Summary: seq-len = 444843 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 99123-102736 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 99123-99791 bp Gene: unk Type: unknown Location: 99794-100567 bp Gene: unk Type: unknown Location: 100575-101840 bp Gene: pfam13280:WYL Type: other Location: 101837-102736 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_21_length_81272_cov_41.941736

⇒Summary: seq-len = 81272 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66832-81253 bp Zoom in on locus 1 x11 Gene: cls000004:cas6 Type: other Location: 66832-67563 bp Gene: unk Type: unknown Location: 67581-68207 bp Gene: unk Type: unknown Location: 68183-68962 bp Gene: cash17:cash17 Type: Type- Location: 69007-70434 bp Gene: unk Type: unknown Location: 70431-70910 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 70924-72333 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 72338-74140 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 74133-75272 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 75292-76131 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 76144-76554 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 76551-77501 bp Gene: cd09634:cas1 Type: universal Location: 77521-79791 bp Gene: cd09725:cas2 Type: universal Location: 79785-80075 bp CRISPR array Location: 80523-81253 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 80523-81253 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 80523-81253 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)