CRISPRone

CRISPRone report for SRR9713321

♦ Seq 1: NODE_30_length_56686_cov_10.541647

⇒Summary: seq-len = 56686 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10129-25044 bp Zoom in on locus 1 x18 Gene: cls000004:cas6 Type: other Location: 10129-10860 bp Gene: unk Type: unknown Location: 10878-11504 bp Gene: unk Type: unknown Location: 11480-12259 bp Gene: cash17:cash17 Type: Type- Location: 12304-13731 bp Gene: unk Type: unknown Location: 13728-14207 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 14221-15630 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 15635-17437 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 17430-18569 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 18589-19428 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 19441-19851 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 19848-20798 bp Gene: cd09634:cas1 Type: universal Location: 20818-23088 bp Gene: cd09725:cas2 Type: universal Location: 23082-23372 bp CRISPR array Location: 23820-25044 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 23820-25044 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23820-25044 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_444842_cov_10.876826

⇒Summary: seq-len = 444842 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 99123-102736 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 99123-99791 bp Gene: unk Type: unknown Location: 99794-100567 bp Gene: unk Type: unknown Location: 100575-101840 bp Gene: pfam13280:WYL Type: other Location: 101837-102736 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)