CRISPRone

CRISPRone report for SRR9713349

♦ Seq 1: NODE_25_length_62286_cov_7.094519

⇒Summary: seq-len = 62286 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38714-42327 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 38714-39613 bp Gene: unk Type: unknown Location: 39610-40875 bp Gene: unk Type: unknown Location: 40883-41656 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 41659-42327 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_56_length_32746_cov_6.474381

⇒Summary: seq-len = 32746 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59-1014 bp Zoom in on locus 1 x14 CRISPR array Location: 59-1014 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 59-1014 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 59-1014 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_62_length_24668_cov_6.748913

⇒Summary: seq-len = 24668 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 686-13582 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 686-2956 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2976-3926 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3923-4333 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4346-5185 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5205-6344 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6337-8139 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8144-9553 bp Gene: unk Type: unknown Location: 9567-10046 bp Gene: cash17:cash17 Type: Type- Location: 10043-11470 bp Gene: unk Type: unknown Location: 11515-12294 bp Gene: unk Type: unknown Location: 12270-12896 bp Gene: cls000004:cas6 Type: other Location: 12914-13582 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)