CRISPRone

CRISPRone report for SRR9713350

♦ Seq 1: NODE_1_length_524664_cov_11.201194

⇒Summary: seq-len = 524664 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 376624-380237 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 376624-377523 bp Gene: unk Type: unknown Location: 377520-378785 bp Gene: unk Type: unknown Location: 378793-379566 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 379569-380237 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_491758_cov_9.246968

⇒Summary: seq-len = 491758 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 445481-460127 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 445481-446212 bp Gene: unk Type: unknown Location: 446230-446856 bp Gene: unk Type: unknown Location: 446832-447611 bp Gene: cash17:cash17 Type: Type- Location: 447656-449083 bp Gene: unk Type: unknown Location: 449080-449559 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 449573-450982 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 450987-452789 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 452782-453921 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 453941-454780 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 454793-455203 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 455200-456150 bp Gene: cd09634:cas1 Type: universal Location: 456170-458440 bp Gene: cd09725:cas2 Type: universal Location: 458434-458724 bp CRISPR array Location: 459172-460127 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 459172-460127 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 459172-460127 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)