CRISPRone

CRISPRone report for SRR9713351

♦ Seq 1: NODE_147_length_11430_cov_5.144000

⇒Summary: seq-len = 11430 bp; # of CRISPR array = 0; # of cas gene = 8  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 780-11429 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 780-3050 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3070-4014 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 4017-4427 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4440-5279 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5299-6438 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6431-8233 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8238-9647 bp Gene: unk Type: unknown Location: 9661-10140 bp Gene: cash17:cash17 Type: Type- Location: 10137-11429 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_217_length_6884_cov_5.113487

⇒Summary: seq-len = 6884 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6000-6884 bp Zoom in on locus 1 x13 CRISPR array Location: 6000-6884 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 6000-6884 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6000-6884 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_620_length_125_cov_1.914286

⇒Summary: seq-len = 125 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25-129 bp Zoom in on locus 1 x2 CRISPR array Location: 25-129 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 25-129 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 25-129 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)