CRISPRone

CRISPRone report for SRR9713352

♦ Seq 1: NODE_1_length_184792_cov_5.583727

⇒Summary: seq-len = 184792 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 138510-153156 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 138510-139241 bp Gene: unk Type: unknown Location: 139259-139885 bp Gene: unk Type: unknown Location: 139861-140640 bp Gene: cash17:cash17 Type: Type- Location: 140685-142112 bp Gene: unk Type: unknown Location: 142109-142588 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 142602-144011 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 144016-145818 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 145811-146950 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 146970-147809 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 147822-148232 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 148229-149179 bp Gene: cd09634:cas1 Type: universal Location: 149199-151469 bp Gene: cd09725:cas2 Type: universal Location: 151463-151753 bp CRISPR array Location: 152201-153156 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 152201-153156 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 152201-153156 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_29_length_50380_cov_5.744998

⇒Summary: seq-len = 50380 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24876-28489 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 24876-25775 bp Gene: unk Type: unknown Location: 25772-27037 bp Gene: unk Type: unknown Location: 27045-27818 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 27821-28489 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)