CRISPRone

CRISPRone report for SRR9713354

♦ Seq 1: NODE_85_length_21352_cov_5.723999

⇒Summary: seq-len = 21352 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2452-6065 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 2452-3351 bp Gene: unk Type: unknown Location: 3348-4613 bp Gene: unk Type: unknown Location: 4621-5394 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 5397-6065 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_44_length_32325_cov_5.185807

⇒Summary: seq-len = 32325 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-32306 bp Zoom in on locus 1 x10 CRISPR array Location: 31633-32306 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 31633-32306 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-32306 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_68_length_26464_cov_5.256655

⇒Summary: seq-len = 26464 bp; # of CRISPR array = 0; # of cas gene = 8  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15755-26424 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 15755-16486 bp Gene: unk Type: unknown Location: 16504-17130 bp Gene: unk Type: unknown Location: 17106-17885 bp Gene: cash17:cash17 Type: Type- Location: 17930-19357 bp Gene: unk Type: unknown Location: 19354-19833 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 19847-21256 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 21261-23063 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 23056-24195 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 24215-25054 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 25067-25477 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 25474-26424 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_245_length_3315_cov_4.851534

⇒Summary: seq-len = 3315 bp; # of CRISPR array = 1; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-3312 bp Zoom in on locus 1 x5 CRISPR array Location: 1-316 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 1-316 bp Num of repeats: 5 Spacers: s1-s4 Gene: cd09634:cas1 Type: universal Location: 1048-3312 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-316 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)