CRISPRone

CRISPRone report for SRR9713357

♦ Seq 1: NODE_21_length_83982_cov_8.134510

⇒Summary: seq-len = 83982 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37705-52351 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 37705-38436 bp Gene: unk Type: unknown Location: 38454-39080 bp Gene: unk Type: unknown Location: 39056-39835 bp Gene: cash17:cash17 Type: Type- Location: 39880-41307 bp Gene: unk Type: unknown Location: 41304-41783 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 41797-43206 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 43211-45013 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 45006-46145 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 46165-47004 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 47017-47427 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 47424-48374 bp Gene: cd09634:cas1 Type: universal Location: 48394-50664 bp Gene: cd09725:cas2 Type: universal Location: 50658-50948 bp CRISPR array Location: 51396-52351 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 51396-52351 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 51396-52351 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_523836_cov_8.775030

⇒Summary: seq-len = 523836 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 376633-380246 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 376633-377532 bp Gene: unk Type: unknown Location: 377529-378794 bp Gene: unk Type: unknown Location: 378802-379575 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 379578-380246 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)