CRISPRone

CRISPRone report for SRR9713387

♦ Seq 1: NODE_11_length_143084_cov_8.073614

⇒Summary: seq-len = 143084 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96807-111453 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 96807-97538 bp Gene: unk Type: unknown Location: 97556-98182 bp Gene: unk Type: unknown Location: 98158-98937 bp Gene: cash17:cash17 Type: Type- Location: 98982-100409 bp Gene: unk Type: unknown Location: 100406-100885 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 100899-102308 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 102313-104115 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 104108-105247 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 105267-106106 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 106119-106529 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 106526-107476 bp Gene: cd09634:cas1 Type: universal Location: 107496-109766 bp Gene: cd09725:cas2 Type: universal Location: 109760-110050 bp CRISPR array Location: 110498-111453 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 110498-111453 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 110498-111453 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_352003_cov_8.748133

⇒Summary: seq-len = 352003 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144428-148041 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 144428-145096 bp Gene: unk Type: unknown Location: 145099-145872 bp Gene: unk Type: unknown Location: 145880-147145 bp Gene: pfam13280:WYL Type: other Location: 147142-148041 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)