CRISPRone

CRISPRone report for SRR9713388

♦ Seq 1: NODE_4_length_140804_cov_5.318084

⇒Summary: seq-len = 140804 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 127018-130631 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 127018-127917 bp Gene: unk Type: unknown Location: 127914-129179 bp Gene: unk Type: unknown Location: 129187-129960 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 129963-130631 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_30_length_51708_cov_5.031925

⇒Summary: seq-len = 51708 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31638-46151 bp Zoom in on locus 1 x13 CRISPR array Location: 31638-32523 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 31638-32523 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09634:cas1 Type: universal Location: 33255-35525 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35545-36495 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36492-36902 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36915-37754 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 37774-38913 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 38906-40708 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 40713-42122 bp Gene: unk Type: unknown Location: 42136-42615 bp Gene: cash17:cash17 Type: Type- Location: 42612-44039 bp Gene: unk Type: unknown Location: 44084-44863 bp Gene: unk Type: unknown Location: 44839-45465 bp Gene: cls000004:cas6 Type: other Location: 45483-46151 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31638-32523 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)